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raphael |
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<?php
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/*
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* @author Raphaël Droz <raphael@tela-botanica.org>
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* @copyright Copyright (c) 2011, 2013 Tela Botanica (accueil@tela-botanica.org)
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* @license http://www.cecill.info/licences/Licence_CeCILL_V2-fr.txt Licence CECILL
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* @license http://www.gnu.org/licenses/gpl.html Licence GNU-GPL
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*
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* Corrige les erreurs de saisie de nom à l'aide d'une recherche via un index sphinx
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* pour les observations ayant un nom saisi et dont l'un au moins de nom_ret[nn],
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* nt ou famille est NULL ou vide.
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*
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*/
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// time php -d memory_limit=1024M sphinx-maj-nom-ret.php 0 > sphinx-maj.log
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// 23 secondes
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raphael |
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// settings
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define('USE_NVJFL', FALSE);
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define('ESCAPE_ON_SPHINX_SYNERROR', TRUE);
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define('TRY_FORCE_START_LINE', TRUE);
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define('TRY_SPLIT', TRUE);
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define('TRY_EXACT', TRUE);
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define('TRY_REF', TRUE);
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define('TRY_SPLIT_AND_AUTEUR', FALSE);
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define('TRY_REMOVE_L', TRUE);
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define('M_TRY_SPLIT', 0x01);
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define('M_TRY_EXACT', 0x02);
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define('M_TRY_REF', 0x04);
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define('M_TRY_SPLIT_AND_AUTEUR', 0x08);
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error_reporting(E_ALL);
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raphael |
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$db = mysql_connect('localhost', 'root', '') or die('no mysql');
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raphael |
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mysql_select_db('tb_cel', $db);
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raphael |
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mysql_query("SET NAMES utf8", $db) or die('no sphinx');
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$dbs = mysql_connect('127.0.0.1:9306', NULL, NULL, TRUE);
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$req = <<<EOF
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SELECT id_observation, nom_sel, nom_sel_nn, nom_ret, nom_ret_nn, nt, famille, nom_referentiel
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FROM `cel_obs`
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WHERE nom_sel IS NOT NULL AND nom_sel != '' AND
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id_observation BETWEEN %d AND %d AND
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( nom_ret IS NULL or nom_ret = ''
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OR nom_ret_nn IS NULL or nom_ret_nn = 0 or nom_ret_nn = ''
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OR nt IS NULL or nt = 0 or nt = ''
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OR famille IS NULL or famille = '' )
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LIMIT %d, %d
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EOF;
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array_shift($argv);
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$start = array_shift($argv);
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$max = array_shift($argv);
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$chunk_size = array_shift($argv);
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if(!$start) $start = 0;
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// 1036314
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if(!$max) $max = intval(mysql_fetch_assoc(mysql_query("SELECT MAX(id_observation) AS max FROM cel_obs", $db))['max']) + 1;
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if(!$chunk_size) $chunk_size = 50000;
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// escape sphinx
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$from = array ( '\\', '(',')','|','-','!','@','~','"','&', '/', '^', '$', '=', "'", "\x00", "\n", "\r", "\x1a" );
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$to = array ( '\\\\', '\\\(','\\\)','\\\|','\\\-','\\\!','\\\@','\\\~','\\\"', '\\\&', '\\\/', '\\\^', '\\\$', '\\\=', "\\'", "\\x00", "\\n", "\\r", "\\x1a" );
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$stats = ['no_nom_sel' => ['count' => 0, 'data' => [] ],
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'not found' => ['count' => 0, 'data' => [] ],
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'too many' => ['count' => 0, 'data' => [] ],
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'fixable' => ['count' => 0, 'data' => [] ],
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'sauvages' => ['count' => 0, 'data' => [] ],
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'sphinx errors' => ['count' => 0, 'data' => [] ],
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'ref pb' => ['count' => 0, 'data' => [] ], ];
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raphael |
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$sphinx_req = sprintf("SELECT * FROM i_bdtfx %s WHERE MATCH('%%s') LIMIT 5", USE_NVJFL ? ", i_nvjfl" : "");
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raphael |
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for($current = 0; $current < intval($max/$chunk_size) + 1; $current++) {
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// printf("current = %d, chunk_size = %d, max = %d (rmax = %d) [real limit: %d]\n", $current, $chunk_size, $max, intval($max/$chunk_size) + 1, $current*$chunk_size);
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// printf(strtr($req, "\n", " ") . "\n", $start, $max, $current*$chunk_size, $chunk_size);
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$data = mysql_query(sprintf($req, $start, $max, $current*$chunk_size, $chunk_size), $db);
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if(!$data) { var_dump(mysql_error()); die('end'); }
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while($d = mysql_fetch_assoc($data)) {
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$n = trim($d['nom_sel']);
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//d: fprintf(STDERR, "$n\n");
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if(!$n) {
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$stats['no_nom_sel']['count']++;
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// $stats['no_nom_sel']['data'][] = [$d['id_observation'], $n];*/
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continue;
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}
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if($n == 'Autre(s) espèce(s) (écrire le/les nom(s) dans les notes)' ||
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$n == '-') {
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$stats['sauvages']['count']++;
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// $stats['sauvages']['data'][] = [$d['id_observation'], $n];
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continue;
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}
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$MASQUE = 0;
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if(TRY_REMOVE_L) {
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$n = str_replace(' L.','', $n);
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}
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$orig_n = $n;
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raphael |
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recherche:
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raphael |
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if(TRY_FORCE_START_LINE && !_has($MASQUE, M_TRY_EXACT)) {
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$n = '^' . $n;
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}
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$s = mysql_query(sprintf($sphinx_req, $n), $dbs);
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if(!$s && ESCAPE_ON_SPHINX_SYNERROR) {
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$s = mysql_query(sprintf($sphinx_req, str_replace($from,$to,$n)), $dbs);
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}
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if(!$s) {
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$stats['sphinx errors']['count']++;
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// $stats['sphinx errors']['data'][] = [$d['id_observation'], $orig_n];
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continue;
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}
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$c = mysql_num_rows($s);
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//d: fprintf(STDERR, "\t search [nb:%d] \"%s\" (msk:%d)\n", $c, $n, $MASQUE);
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if($c == 0) {
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if(TRY_SPLIT && !_has($MASQUE, M_TRY_SPLIT)) {
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require_once('lib-split-auteur.php');
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$MASQUE |= M_TRY_SPLIT;
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// $n = RechercheInfosTaxonBeta::supprimerAuteur($orig_n);
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// list($ret, $m) = RechercheInfosTaxonBeta::contientAuteur($orig_n);
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$ret = RechercheInfosTaxonBeta::supprimerAuteurBis($orig_n, $m);
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if($ret) {
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// printf("===================== SPLIT: contientAuteur \"%s\" [@%s @%s)\n", $orig_n, $ret, $m);
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$n = sprintf('%s @auteur %s', $ret, $m);
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goto recherche;
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}
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}
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if(TRY_SPLIT_AND_AUTEUR && !_has($MASQUE, M_TRY_SPLIT_AND_AUTEUR) && strpos($orig_n, ' ') !== FALSE) {
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require_once('lib-split-auteur.php');
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$MASQUE |= M_TRY_SPLIT_AND_AUTEUR;
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$ns = RechercheInfosTaxonBeta::supprimerAuteur($orig_n);
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if($ns) {
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$a = trim(substr($orig_n, strlen($n)));
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$n = sprintf("%s @auteur %s", $ns, $a);
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// echo "===================== SPLIT N/A: $n\n";
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goto recherche;
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}
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}
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$stats['not found']['count']++;
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// $stats['not found']['data'][] = [$d['id_observation'], $orig_n];
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continue;
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}
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if($c > 1) {
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raphael |
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if($c == 2) {
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if(mysql_fetch_array($s)['group_id'] !=
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mysql_fetch_array($s)['group_id']) {
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// recherche donne seulement 2 résultats dans 2 référentiels
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// potentiellement fixable si l'on peut se référer à $d['nom_referentiel']
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$stats['ref pb']['count']++;
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// $stats['ref pb']['data'][] = [$d['id_observation'], $orig_n];
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continue;
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}
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}
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if(TRY_EXACT && !_has($MASQUE, M_TRY_EXACT)) {
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$MASQUE |= M_TRY_EXACT;
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$n = '"^' . trim($orig_n) . '$"';
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goto recherche;
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}
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if(TRY_REF && isset($d['nom_referentiel']) && !_has($MASQUE, M_TRY_REF)) {
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$MASQUE |= M_TRY_REF;
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$n = $orig_n . ' @group_id ' . $d['nom_referentiel'];
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goto recherche;
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}
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$stats['too many']['count']++;
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// $stats['too many']['data'][] = [$d['id_observation'], $orig_n];
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continue;
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}
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raphael |
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ok:
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raphael |
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$stats['fixable']['count']++;
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// $stats['fixable']['data'][] = [$d['id_observation'], $orig_n];
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raphael |
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}
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}
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function _has($v, $r) {
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return ($v & $r) == $r;
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}
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raphael |
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array_walk($stats, function(&$v) { unset($v['data']); });
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print_r($stats);
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printf("total traité: %d\n", array_sum(array_map(function($v) { return $v['count']; }, $stats)));
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