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mathilde |
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<?php
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/**
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*
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* /opt/lampp/bin/php -d memory_limit=3500M ~/web/eflore-projets/scripts/cli.php baseflor/Baseflor_rang_sup_insertion
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* -a insererDonnees
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* @author Mathilde SALTHUN-LASSALLE <mathilde@tela-botanica.org>
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*
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*
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*/
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class BaseflorRangSupInsertion {
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private $table = null;
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private $donnees_initiales = array();
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private $valeurs_insertion;
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private $infos_taxon = array();
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private $conteneur;
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private $efloreCommun;
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private $message;
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private $outils;
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private $nn_courant;
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private $nn_superieur;
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private $champs_ecologiques = array();
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public function __construct(Conteneur $conteneur) {
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$this->conteneur = $conteneur;
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$this->efloreCommun = $conteneur->getEfloreCommun();
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$this->message = $conteneur->getMessages();
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$this->outils = $conteneur->getOutils();
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$this->dossierBase = dirname(__FILE__).'/';
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}
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public function insererDonnees(){
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echo "Chargement de la structure en cours \n" ;
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$this->efloreCommun->chargerStructureSql('chemins.rang_sup_sql');
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echo "Récupération des données de baseflor en cours \n";
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$this->recupererDonneesInitiales();
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echo "Calcul des valeurs pour les rangs supérieurs en cours \n";
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$this->consulterInfosTaxons();
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$this->recupererValeursInsertion();
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$this->insererDonneesRangSup();
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}
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private function insererDonneesRangSup() {
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$table = Config::get('tables.rang_sup');
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$requete_truncate = 'TRUNCATE TABLE '.$table;
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$this->efloreCommun->getBdd()->requeter($requete_truncate);
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foreach ($this->valeurs_insertion as $nn => $valeurs){
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$requete = "INSERT INTO $table VALUES($nn, 'bdtfx', '{$valeurs['ve_lumiere']['min']}', ".
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"'{$valeurs['ve_lumiere']['max']}','{$valeurs['ve_temperature']['min']}',".
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"'{$valeurs['ve_temperature']['max']}','{$valeurs['ve_continentalite']['min']}',".
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"'{$valeurs['ve_continentalite']['max']}','{$valeurs['ve_humidite_atmos']['min']}',".
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"'{$valeurs['ve_humidite_atmos']['max']}','{$valeurs['ve_humidite_edaph']['min']}',".
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"'{$valeurs['ve_humidite_edaph']['max']}','{$valeurs['ve_reaction_sol']['min']}',".
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"'{$valeurs['ve_reaction_sol']['max']}','{$valeurs['ve_nutriments_sol']['min']}',".
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"'{$valeurs['ve_nutriments_sol']['max']}','{$valeurs['ve_salinite']['min']}',".
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"'{$valeurs['ve_salinite']['max']}','{$valeurs['ve_texture_sol']['min']}',".
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"'{$valeurs['ve_texture_sol']['max']}','{$valeurs['ve_mat_org_sol']['min']}',".
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"'{$valeurs['ve_mat_org_sol']['max']}');";
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$this->efloreCommun->getBdd()->requeter($requete);
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$this->message->afficherAvancement('Insertion des valeurs pour les rangs supérieurs en cours');
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}
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}
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// dans cette solution je parcours les donnees de baseflor
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// je teste une donnée (si min max) pour récuperer les valeurs pour chaque rang superieur
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// jusqu'à famille (180) puis je passe à la suivante jusqu'à avoir parcouru tout baseflor
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private function recupererValeursInsertion(){
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$this->champs_ecologiques = $this->outils->recupererTableauConfig(Config::get('Parametres.champsEcologiques'));
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$this->valeurs_insertion = array();
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if (empty($this->donnees_initiales)) {
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throw new Exception("Erreur : pas de données à traiter.");
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} else {
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foreach ($this->donnees_initiales as $nn => $ecologie) {
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$this->nn_courant = $nn;
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$this->nn_superieur = isset($this->infos_taxon[$this->nn_courant]) ? $this->infos_taxon[$this->nn_courant]['nn_sup'] : null;
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$rang = isset($this->infos_taxon[$this->nn_superieur]) ? $this->infos_taxon[$this->nn_superieur]['rang'] : 179 ;
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while ($rang >= 180){
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if (!isset($donnees_initiales[$this->nn_superieur])) {
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foreach ($this->champs_ecologiques as $nom) {
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$this->testerSiMinMax($nom, $ecologie[$nom]);
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}
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}
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$this->nn_superieur = isset($this->infos_taxon[$this->nn_superieur]) ? $this->infos_taxon[$this->nn_superieur]['nn_sup'] : null;
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$rang = !empty($this->nn_superieur) ? $this->infos_taxon[$this->nn_superieur]['rang'] : 179 ;
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}
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}
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}
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}
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// ici je parcours toutes les données de baseflor et je teste et récupère les valeurs pour le rang superieur
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//direct puis je récupère les données obtenues et je recommence jusqu'à que tous les rangs obtenus soient des familles
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private function recupererValeursInsertion2(){
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$this->champs_ecologiques = $this->outils->recupererTableauConfig(Config::get('Parametres.champsEcologiques'));
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$this->valeurs_insertion = array();
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if (empty($this->donnees_initiales)) {
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throw new Exception("Erreur : pas de données à traiter.");
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} else {
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$donnees_traitees = $this->donnees_initiales;
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$donnees_deja_traitees = array();
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$condition_fin = true;
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$tab_num_nom = array_keys($donnees_traitees);
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while (!empty($donnees_traitees)) {
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reset($donnees_traitees);
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$this->nn_courant = array_shift($tab_num_nom);
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$data = array_shift($donnees_traitees);
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if (isset($this->infos_taxon[$this->nn_courant])) {
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$this->nn_superieur = $this->infos_taxon[$this->nn_courant]['nn_sup'];
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if (!isset($donnees_deja_traitees[$this->nn_courant])) {
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if ($this->infos_taxon[$this->nn_superieur]['rang'] >= 180){
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$condition_fin = false;
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foreach ($this->champs_ecologiques as $nom) {
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$this->testerSiMinMax($nom, $data[$nom]);
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}
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}
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}
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$donnees_deja_traitees[$this->nn_courant] = 1;
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}
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if ($condition_fin == false && empty($donnees_traitees)) {
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$donnees_traitees = $this->valeurs_insertion;
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$tab_num_nom = array_keys($donnees_traitees);
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$condition_fin = true;
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}
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}
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}
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}
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// je stocke des valeurs à insérer sous la forme : $insertion [{nn_tax_sup}][{nom_de_chps}][{max ou min}] = {valeur}
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private function testerSiMinMax($nom, $valeur) {
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$nn = $this->nn_superieur;
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if ( !isset($this->valeurs_insertion[$nn][$nom]['min'])
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|| empty($valeur['min'])
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|| empty($this->valeurs_insertion[$nn][$nom]['min'])
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|| $this->valeurs_insertion[$nn][$nom]['min'] > $valeur['min'] ){
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$this->valeurs_insertion[$nn][$nom]['min'] = $valeur['min'];
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}
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if ( !isset($this->valeurs_insertion[$nn][$nom]['max'])
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|| empty($this->valeurs_insertion[$nn][$nom]['max'])
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|| empty($valeur['max'])
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|| $this->valeurs_insertion[$nn][$nom]['max'] < $valeur['max'] ) {
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$this->valeurs_insertion[$nn][$nom]['max'] = $valeur['max'];
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}
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}
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// je stocke les infos taxons sous la forme : $info_taxon[{num_nomem}][{num_nomen_sup ou rang}] = {valeur}
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private function consulterInfosTaxons() {
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$table = Config::get('tables.taxons');
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$requete = 'SELECT A.num_nom AS nn, B.num_tax_sup AS nn_sup, A.rang '.
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"FROM $table A JOIN $table B ON (A.num_nom_retenu = B.num_nom) ".
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'WHERE B.num_nom = B.num_nom_retenu ';
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$resultat = $this->efloreCommun->getBdd()->recupererTous($requete);
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foreach ($resultat as $res) {
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$this->infos_taxon[$res['nn']] = array('nn_sup' => $res['nn_sup'], 'rang' => $res['rang'] );
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}
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}
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// je stocke les valeurs initiales sous la forme : $initiales[{nn_nomem}][{champs ecologique}][{'min' ou 'max'}]
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private function recupererDonneesInitiales() {
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$table = Config::get('tables.donnees');
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$requete = "SELECT num_nomen, ve_lumiere, ve_temperature, ve_continentalite, ve_humidite_atmos, ".
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"ve_humidite_edaph, ve_reaction_sol, ve_nutriments_sol, ve_salinite, ve_texture_sol, ve_mat_org_sol ".
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"FROM $table WHERE BDNT = 'BDTFX' ".
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" AND num_nomen != 0 ".
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" AND (ve_lumiere != '' OR ve_mat_org_sol != '' OR ve_temperature != '' ".
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" OR ve_continentalite != '' OR ve_humidite_atmos != '' OR ve_humidite_edaph != '' ".
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" OR ve_nutriments_sol != '' OR ve_salinite != '' OR ve_texture_sol != '' OR ve_reaction_sol != '' )";
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$resultat = $this->efloreCommun->getBdd()->recupererTous($requete);
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foreach ($resultat as $res) {
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$this->donnees_initiales[$res['num_nomen']] = array(
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've_lumiere' => array('min' => $res['ve_lumiere'], 'max' => $res['ve_lumiere']),
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've_temperature' => array('min' => $res['ve_temperature'], 'max' => $res['ve_temperature']),
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've_continentalite' => array('min' => $res['ve_continentalite'], 'max' => $res['ve_continentalite']),
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've_humidite_atmos' => array('min' => $res['ve_humidite_atmos'], 'max' => $res['ve_humidite_atmos']),
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've_humidite_edaph' => array('min' => $res['ve_humidite_edaph'], 'max' => $res['ve_humidite_edaph']),
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've_reaction_sol' => array('min' => $res['ve_reaction_sol'], 'max' => $res['ve_reaction_sol']),
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've_nutriments_sol' => array('min' => $res['ve_nutriments_sol'], 'max' => $res['ve_nutriments_sol']),
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've_salinite' => array('min' => $res['ve_salinite'], 'max' => $res['ve_salinite']),
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've_texture_sol' => array('min' => $res['ve_texture_sol'], 'max' => $res['ve_texture_sol']),
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've_mat_org_sol' => array('min' => $res['ve_mat_org_sol'], 'max' => $res['ve_mat_org_sol']));
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}
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}
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// +++ Fonctions de vérification des donnée obtenues ++++//
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public function testAscendantsDeBaseflor(){
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$this->recupererDonneesInitiales();
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$this->consulterInfosTaxons();
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$fichier = dirname(__FILE__).'/log/verifTaxonsSup.log';
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$liste = array();
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foreach ($this->donnees_initiales as $nn => $data) {
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$nn_sup = isset($this->infos_taxon[$nn]) ? $this->infos_taxon[$nn]['nn_sup'] : '' ;
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if (!empty($nn_sup) && !isset($donnees_initiales[$nn_sup])){
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$rang = isset($this->infos_taxon[$nn_sup]) ? $this->infos_taxon[$nn_sup]['rang'] : 179 ;
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while ($rang >= 180) {
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if (!empty($nn_sup)) {
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if (isset($liste["$nn_sup($rang)"])){
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$liste["$nn_sup($rang)"] .= ", $nn";
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}else {
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$liste["$nn_sup($rang)"] = "$nn";
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}
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$nn_sup = isset($this->infos_taxon[$nn_sup]) ? $this->infos_taxon[$nn_sup]['nn_sup'] : '' ;
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$rang = isset($this->infos_taxon[$nn_sup]) ? $this->infos_taxon[$nn_sup]['rang'] : 179 ;
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}else {
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break;
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}
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}
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}
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}
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$log = "un ascendant (pas forcement l'ascendant directement au dessus) : les descendants contenus dans baseflor \n";
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foreach ($liste as $cle => $inferieur){
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$log .= "$cle : $inferieur \n";
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}
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file_put_contents($fichier, $log);
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}
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public function testEcologieAscendantsDeBaseflor(){
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$this->recupererDonneesInitiales();
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$this->consulterInfosTaxons();
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$fichier = dirname(__FILE__).'/log/verifTaxonsSupEcolo.log';
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$liste = array();
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foreach ($this->donnees_initiales as $nn => $data) {
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$nn_sup = isset($this->infos_taxon[$nn]) ? $this->infos_taxon[$nn]['nn_sup'] : '' ;
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if (!empty($nn_sup) && !isset($donnees_initiales[$nn_sup])){
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$rang = isset($this->infos_taxon[$nn_sup]) ? $this->infos_taxon[$nn_sup]['rang'] : 179 ;
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while ($rang >= 180) {
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if (!empty($nn_sup)) {
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$ecolo = array_values($data);
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list($l,$t,$c,$ha,$he,$r,$n,$s,$tx,$mo) = $ecolo;
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if (isset($liste["$nn_sup($rang)"])){
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$liste["$nn_sup($rang)"] .= ",[{$l['min']}, {$t['min']}, {$c['min']},"
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."{$ha['min']}, {$he['min']}, {$r['min']}, {$n['min']}, {$s['min']},"
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."{$tx['min']}, {$mo['min']}]";
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}else {
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$liste["$nn_sup($rang)"] = "[{$l['min']}, {$t['min']}, {$c['min']},"
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."{$ha['min']}, {$he['min']}, {$r['min']}, {$n['min']}, {$s['min']},"
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."{$tx['min']}, {$mo['min']}]";
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}
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$nn_sup = isset($this->infos_taxon[$nn_sup]) ? $this->infos_taxon[$nn_sup]['nn_sup'] : '' ;
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$rang = isset($this->infos_taxon[$nn_sup]) ? $this->infos_taxon[$nn_sup]['rang'] : 179 ;
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}else {
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break;
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}
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}
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}
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}
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$log = "nn ascendant (pas forcement l'ascendant directement au dessus) :"
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." valeurs descendants contenus dans baseflor \n"
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."Pour le calcul des valeurs min et max de gauche, les valeurs de droite sont utilisées. \n";
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foreach ($liste as $cle => $inferieurs){
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$log .= "$cle : $inferieurs \n";
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}
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file_put_contents($fichier, $log);
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}
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}
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