| New file |
|---|
| 0,0 → 1,329 |
|---|
| <?php |
| class Index { |
| |
| const DOSSIER_V0 = '../../../donnees/coste/0.00/'; |
| const DOSSIER_V2 = '../../../donnees/coste/2.00/'; |
| |
| private $conteneur = null; |
| private $outils = null; |
| private $messages = null; |
| private $generateur = null; |
| private $dossierBase = ''; |
| private $spIndex = array(); |
| private $supraSpIndex = array(); |
| private $imgIndex = array(); |
| private $indexFinal = array(); |
| private $tableauParDefaut = array(); |
| private $nbreTaxonInf = array(); |
| private $enteteFinal = array( |
| 'num_nom', |
| 'num_nom_retenu', |
| 'num_tax_sup', |
| 'rang', |
| 'nom_sci', |
| 'nom_supra_generique', |
| 'genre', |
| 'epithete_infra_generique', |
| 'epithete_sp', |
| 'type_epithete', |
| 'epithete_infra_sp', |
| 'cultivar_groupe', |
| 'cultivar', |
| 'nom_commercial', |
| 'auteur', |
| 'annee', |
| 'biblio_origine', |
| 'notes', |
| 'nom_addendum', |
| 'nom_francais', |
| 'nom_coste', |
| 'auteur_coste', |
| 'biblio_coste', |
| 'num_nom_coste', |
| 'num_nom_retenu_coste', |
| 'num_tax_sup_coste', |
| 'synonymie_coste', |
| 'tome', |
| 'page', |
| 'nbre_taxons', |
| 'flore_bdtfx_nn', |
| 'flore_bdtfx_nt', |
| 'image', |
| 'image_auteur', |
| 'page_wiki_dsc', |
| 'page_wiki_cle', |
| 'nom_sci_html'); |
| |
| public function __construct(Conteneur $conteneur) { |
| mb_internal_encoding('UTF-8'); |
| setlocale(LC_ALL, 'fr_FR.UTF-8'); |
| $this->conteneur = $conteneur; |
| $this->outils = $conteneur->getOutils(); |
| $this->messages = $conteneur->getMessages(); |
| $this->generateur = $conteneur->getGenerateurNomSciHtml(); |
| $this->dossierBase = dirname(__FILE__).'/'; |
| } |
| |
| public function fusionnerIndex() { |
| $this->chargerIndexSp(); |
| $this->chargerIndexSupraSp(); |
| $this->initialiserTableauLigneIndexFinal(); |
| $this->creerIndexFinal(); |
| $this->insererCorrections(); |
| $this->ajouterChampsDansIndexFinal(); |
| $this->ajouteurAuteurImage(); |
| $this->decomposerNomSci(); |
| $this->ajouteurNomSciHtml(); |
| $this->creerFichierCsvIndexFinal(); |
| } |
| |
| private function chargerIndexSp() { |
| $spIndexFichier = $this->dossierBase.self::DOSSIER_V0.'index_general_sp.tsv'; |
| $index = $this->outils->transformerTxtTsvEnTableau($spIndexFichier); |
| $index = $this->reindexerParNumNomCoste($index); |
| foreach ($index as $numNomCoste => $infos) { |
| $numTaxSup = ''; |
| if ($infos['num_nom_coste'] == $infos['num_nom_retenu_coste']) { |
| $numTaxSup = $infos['num_tax_sup_coste']; |
| } else { |
| $infosNomRetenu = $index[$infos['num_nom_retenu_coste']]; |
| $numTaxSup = $infosNomRetenu['num_tax_sup_coste']; |
| } |
| $this->spIndex[$numTaxSup][] = $infos; |
| } |
| } |
| |
| private function reindexerParNumNomCoste($index) { |
| $nouvelIndex = array(); |
| foreach ($index as $infos) { |
| $nouvelIndex[$infos['num_nom_coste']] = $infos; |
| } |
| return $nouvelIndex; |
| } |
| |
| private function chargerIndexSupraSp() { |
| $infraSpIndexFichier = $this->dossierBase.self::DOSSIER_V0.'index_general.tsv'; |
| $this->supraSpIndex = $this->outils->transformerTxtTsvEnTableau($infraSpIndexFichier); |
| foreach ($this->supraSpIndex as $cle => $infos) { |
| $this->supraSpIndex[$cle]['num_nom_retenu_coste'] = $infos['num_nom_coste']; |
| } |
| } |
| |
| private function initialiserTableauLigneIndexFinal() { |
| $this->tableauParDefaut = array(); |
| foreach ($this->enteteFinal as $cle) { |
| $this->tableauParDefaut[$cle] = ''; |
| } |
| } |
| |
| private function creerIndexFinal() { |
| foreach ($this->supraSpIndex as $infos) { |
| $this->ajouterDansIndexFinal($infos); |
| if (preg_match('/^G[0-9]+$/', $infos['num_nom_coste'])) { |
| foreach ($this->spIndex[$infos['num_nom_coste']] as $infosSp) { |
| $this->ajouterDansIndexFinal($infosSp); |
| } |
| } |
| } |
| } |
| |
| private function ajouterDansIndexFinal($infos) { |
| $infos = array_merge($this->tableauParDefaut, $infos); |
| $infos['num_nom'] = (count($this->indexFinal) + 1); |
| $this->indexFinal[$infos['num_nom_coste']] = $infos; |
| } |
| |
| private function ajouterChampsDansIndexFinal() { |
| $this->genererNbreTaxons(); |
| foreach ($this->indexFinal as $nnc => $infos) { |
| if ($infos['num_nom_coste'] == $infos['num_nom_retenu_coste']) { |
| $infos['num_nom_retenu'] = $infos['num_nom']; |
| if ($nnc != 'R') { |
| $nomSuperieur = $this->indexFinal[$infos['num_tax_sup_coste']]; |
| $infos['num_tax_sup'] = $nomSuperieur['num_nom']; |
| } |
| $nomRetenu = $infos; |
| } else { |
| $nomRetenu = $this->indexFinal[$infos['num_nom_retenu_coste']]; |
| $infos['num_nom_retenu'] = $nomRetenu['num_nom']; |
| $infos['page'] = $nomRetenu['page']; |
| $infos['tome'] = $nomRetenu['tome']; |
| } |
| $infos['image'] = $this->obtenirNomFichierImg($nomRetenu); |
| $infos['nbre_taxons'] = $this->obtenirNbreTaxon($infos); |
| $nomRetenu['nbre_taxons'] = $infos['nbre_taxons']; |
| $infos['page_wiki_dsc'] = $this->genererPageWikiDsc($nomRetenu); |
| $infos['page_wiki_cle'] = $this->genererPageWikiCle($nomRetenu); |
| |
| $this->indexFinal[$nnc] = $infos; |
| } |
| } |
| |
| private function genererNbreTaxons() { |
| foreach ($this->indexFinal as $infos) { |
| if ($infos['num_tax_sup_coste'] != '') { |
| if (isset($this->nbreTaxonInf[$infos['num_tax_sup_coste']])) { |
| $this->nbreTaxonInf[$infos['num_tax_sup_coste']] += 1; |
| } else { |
| $this->nbreTaxonInf[$infos['num_tax_sup_coste']] = 1; |
| } |
| } |
| } |
| } |
| |
| private function genererPageWikiDsc($infos) { |
| $prefixe = $this->genererPrefixePage($infos); |
| if ($infos['rang'] == '180') { |
| $nomSci = str_replace(' ', '', ucwords(strtolower($infos['nom_coste']))); |
| } else { |
| $nomSci = str_replace(' ', '', ucwords(strtolower($infos['nom_sci']))); |
| } |
| $pageWiki = $prefixe.$nomSci; |
| return $pageWiki; |
| } |
| |
| private function genererPageWikiCle($infos) { |
| $pageWiki = ''; |
| if ($infos['nbre_taxons'] > 1) { |
| $prefixe = $this->genererPrefixePage($infos); |
| if ($infos['rang'] == '20') { |
| $pageWiki = $prefixe.'TabClaEtEmb'; |
| } elseif ($infos['rang'] == '40' && ($infos['num_nom_coste'] == 'E2' || $infos['num_nom_coste'] == 'E3')) { |
| $pageWiki = $prefixe.'TabFam'; |
| } else if ($infos['rang'] == '80') { |
| $pageWiki = $prefixe.'TabFam'; |
| } else if ($infos['rang'] == '180') { |
| $pageWiki = $prefixe.'TabGen'; |
| } else if ($infos['rang'] == '220') { |
| $pageWiki = $prefixe.'TabSp'; |
| } |
| } |
| return $pageWiki; |
| } |
| |
| private function genererPrefixePage($infos) { |
| $prefixe = ''; |
| $num = preg_replace('/^[a-z]*([0-9]+)(?:[.][0-9a-z]|)$/i', '$1', $infos['num_nom_coste']); |
| if (preg_match('/^([0-9]+)[.][0-9a-z]$/i', $infos['num_nom_coste'], $match)) { |
| $num = sprintf('%04s', $match[1]); |
| } else if ($infos['rang'] == 20 ) { |
| $num = ''; |
| } else if ($infos['rang'] < 80 ) { |
| $num = sprintf('%02s', $num); |
| } else if ($infos['rang'] < 290 ) { |
| $num = sprintf('%03s', $num); |
| } else { |
| $num = sprintf('%04s', $num); |
| } |
| $rangsTxt = array('20' => 'Reg', '40' => 'Emb', '80' => 'Cla', '180' => 'Fam', '220' => 'Gen', '290' => 'Esp', '340' => 'Var'); |
| $rang = $rangsTxt[$infos['rang']]; |
| |
| $prefixe = $rang.$num; |
| return $prefixe; |
| } |
| |
| private function obtenirNbreTaxon($infos) { |
| $nbre = ''; |
| if (isset($this->nbreTaxonInf[$infos['num_nom_coste']])) { |
| $nbre = $this->nbreTaxonInf[$infos['num_nom_coste']]; |
| } |
| return $nbre; |
| } |
| |
| private function obtenirNomFichierImg($infos) { |
| $img = ''; |
| if ($infos['rang'] == '290') { |
| $prefixe = preg_replace('/[.][a-z]$/', '', $infos['num_nom_retenu']); |
| $img = $prefixe.'.png'; |
| } |
| return $img; |
| } |
| |
| private function ajouteurAuteurImage() { |
| $this->chargerAuteurImg(); |
| foreach ($this->indexFinal as $nnc => $infos) { |
| $infos['image_auteur'] = $this->imgIndex[$infos['image']]; |
| $this->indexFinal[$nnc] = $infos; |
| } |
| } |
| |
| private function chargerAuteurImg() { |
| $imgIndexFichier = $this->dossierBase.self::DOSSIER_V0.'coste_images_auteur_correspondance_bdnff.tsv'; |
| $index = $this->outils->transformerTxtTsvEnTableau($imgIndexFichier); |
| foreach ($index as $infos) { |
| $id = $infos['id_image']; |
| $this->imgIndex[$id] = $infos['auteur']; |
| } |
| } |
| |
| private function decomposerNomSci() { |
| $majuscule = "[ÆŒA-Z]"; |
| $epithete = "[æœïa-z-]+"; |
| foreach ($this->indexFinal as $nnc => $infos) { |
| $id = $infos['num_nom_coste']; |
| $nomSci = $infos['nom_sci']; |
| $rang = $infos['rang']; |
| if ($rang < 220) { |
| $infos['nom_supra_generique'] = $nomSci; |
| } else if ($rang == 220) { |
| $infos['genre'] = $nomSci; |
| } else if ($rang == 290) { |
| if (preg_match("/^($majuscule$epithete) ($epithete)$/", $nomSci, $match)) { |
| $infos['genre'] = $match[1]; |
| $infos['epithete_sp'] = $match[2]; |
| } else { |
| $this->messages->traiterErreur("Le nom $nomSci ($id) de rang $rang n'est pas standard."); |
| } |
| } else if ($rang == 340) { |
| if (preg_match("/^($majuscule$epithete) ($epithete) (var[.]) ($epithete)$/", $nomSci, $match)) { |
| $infos['genre'] = $match[1]; |
| $infos['epithete_sp'] = $match[2]; |
| $infos['type_epithete'] = $match[3]; |
| $infos['epithete_infra_sp'] = $match[4]; |
| } else { |
| $this->messages->traiterErreur("Le nom $nomSci ($id) de rang $rang n'est pas standard."); |
| } |
| } |
| |
| $this->indexFinal[$nnc] = $infos; |
| $this->messages->afficherAvancement("Décomposition des noms scientifiques en cours"); |
| } |
| echo "\n"; |
| } |
| |
| private function ajouteurNomSciHtml() { |
| foreach ($this->indexFinal as $nnc => $infos) { |
| $this->indexFinal[$nnc]['nom_sci_html'] = $this->generateur->genererNomSciHtml($infos); |
| $this->messages->afficherAvancement("Création des noms scientifiques HTML en cours"); |
| } |
| echo "\n"; |
| } |
| |
| private function insererCorrections() { |
| $correctionsFichier = $this->dossierBase.self::DOSSIER_V2.'coste_v2_00_corrections.tsv'; |
| $corrections = $this->outils->transformerTxtTsvEnTableau($correctionsFichier); |
| foreach ($corrections as $infos) { |
| $nnc = $infos['num_nom_coste']; |
| $infosACorriger = isset($this->indexFinal[$nnc]) ? $this->indexFinal[$nnc] : array(); |
| foreach ($corrections as $champ => $valeur) { |
| $infosACorriger[$champ] = $valeur; |
| } |
| $this->indexFinal[$nnc] = $infosACorriger; |
| } |
| } |
| |
| private function creerFichierCsvIndexFinal() { |
| $lignes = array(); |
| array_unshift($this->indexFinal, $this->enteteFinal); |
| foreach ($this->indexFinal as $infos) { |
| $lignes[] = implode("\t", $infos); |
| } |
| |
| $txt = ''; |
| $txt = implode("\n", $lignes); |
| |
| $fichierTsvIndexFinal = $this->dossierBase.self::DOSSIER_V2.'coste_v2_00.tsv'; |
| file_put_contents($fichierTsvIndexFinal, $txt); |
| } |
| } |
| ?> |